Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015923346.1_cds_XP_016471978.1_64259
CDS Infomation

[gene=LOC107794035] [db_xref=GeneID:107794035] [protein=pectate lyase-like] [protein_id=XP_016471978.1] [location=complement(join(81944..82165,82436..82678,82773..83424,83827..84014))] [gbkey=CDS]
Sequence

ATGGGAACTCTCAAAAATAGGTCGATTTTCTTTGTTTCAGTCACTCTAGTTTTAAGCATA
GAGGCCAATATTAGTGAGTTTGATGAGGTGTGGCAGACTCGAGCTACGCAAGCAAAGAAA
ACTGCTCAGGATTCCTATAATCCTCATCCTGAAACCGTCGCAGACAATCTCAACAAACAT
GTTCACACGTCGGAAGAAGGTAGCAATAGCACAAGGAGAGACTTGCACAAGTACAATGGT
CCATGCATGTCTACTAACCCTATTGATCGTTGCTGGAGATGTGACCCAAACTGGGCTAAA
ACCCGCATGAAGCTAGCTGATTGTGTTCTTGGATTCGGCCACCATACAACTGGTGGCAAA
GGTGGCAAAATCTACATAGTAACTGACCCTTCAGACGACGATATGGTGAATCCTAAGCCA
GGAACACTGCGCCATGCAGTCATTCAACCAGAGCCACTTTGGATCATATTTAAACATCAC
ATGGTCATTAGGCTTAACCAGGAACTTATCATGACAAGCAACAAGACAATTGATGCCAGA
GGGCAACAAGTACACATTGCCTTTGGTGCTAGTTTCATGTTACAGTTCATTAACAATGTG
ATTATTCATGGTCTTCATATCCATGATATTAAGGCTGGTAATGGTGGCCTAATCAGAGAC
TCGATTAATCATTATGGTTTTCGATCAAGAAGTGATGGTGATGGTATTTCAATCTTTGGA
TCCACAAATATTTGGATTGATCATGTTTCCATGTCTAATTGTGATGATGGACTCATTGAT
GCTGTCCAGGCTTCAACTGCTATTACCATTTCCAACTGCCATTTCACTAACCATAATGAT
GTTATGTTGTTTGGAGCAAGTGATAGCTACTCGGAGGACTCAATTTTACAGATAACACTT
GCTTTTAATCACTTTGGACAAGGATTGATCCAGAGGATGCCAAGAGTGAGATGGGGATTT
GTTCATGCAGTCAACAATGATTACACTCACTGGCTAATGTATGCAATTGGTGGAAGCCAA
CACCCCACCATCCTCAGCCAGGGCAACCGGTTCATCGCCCCGCCTAACCCTAATGCAAAG
GAGGTGACCAAAAGGGAGTATTCACCTGAAAGTGTGTGGAAGAATTGGGTGTGGAGATCA
CAGGGAGATCTGATGATGAACGGAGCGTTCTTTGTGGAATCTGGAAATCCCAATCATATA
TTCATGAAGGGTCCTGATATGATCCACCCTAGGCCAGGATCATATGCAAGCAGGCTAACA
AGATTTTCAGGCTCTTTGAACTGCATTGAGGGGAAGCCTTGTTAG

Peptide Sequence

PEP ID

XP_016471978.1
PEP Infomation

PREDICTED: pectate lyase-like [Nicotiana tabacum]
Sequence

MGTLKNRSIFFVSVTLVLSIEANISEFDEVWQTRATQAKKTAQDSYNPHPETVADNLNKH
VHTSEEGSNSTRRDLHKYNGPCMSTNPIDRCWRCDPNWAKTRMKLADCVLGFGHHTTGGK
GGKIYIVTDPSDDDMVNPKPGTLRHAVIQPEPLWIIFKHHMVIRLNQELIMTSNKTIDAR
GQQVHIAFGASFMLQFINNVIIHGLHIHDIKAGNGGLIRDSINHYGFRSRSDGDGISIFG
STNIWIDHVSMSNCDDGLIDAVQASTAITISNCHFTNHNDVMLFGASDSYSEDSILQITL
AFNHFGQGLIQRMPRVRWGFVHAVNNDYTHWLMYAIGGSQHPTILSQGNRFIAPPNPNAK
EVTKREYSPESVWKNWVWRSQGDLMMNGAFFVESGNPNHIFMKGPDMIHPRPGSYASRLT
RFSGSLNCIEGKPC

Transcript Sequence

Gene sequence data has not been registered.